Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364468: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278171' containing sample 'Staphylococcus aureus M0581'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.1M spots, 425.4M bases, 199.6Mb downloads

UUID: 04fc1348-6caa-4146-9912-34d1c12e6269

Design: Illumina sequencing of Staphylococcus aureus M0581 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216554 • SRP031315 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0581

SAMN02325507 • SRS490886 • All experiments • All runs

Organism: Staphylococcus aureus M0581

Library:

Name: Pond-278171

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 388297.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4S45F

material_type: DNA:DNA Somatic

product_order: PDO-1800

product_part_number: P-WG-0004

project: G44842

research_project: RP-433

root_sample_id: SM-4CVH6

sample_id: SM-4S45F

work_request: 37549

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 10:02:10.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.1M spots, 425.4M bases, 199.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012026	2,105,811	425.4M	199.6Mb	2013-10-16

ID:: 521286

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